Counting the Omer is not just a mitzvah, but is a mitzvah based in Kabbalah. We are instructed to count the Omer, but what are we counting? Why count 49 days of the Omer at all?
Are you in sync with your life? A core Jewish concept is the inner goodness of mankind. While there is an evil inclination, mankind is intrinsically good and pure. Otherwise, how could HaShem ask us to be holy before showing us how?
The Torah is full of metaphor, and in some cases, a metaphor of itself (sounds meta, right?). Being able to see these metaphors and apply them is to go beyond the first level of Torah interpretation. There are four levels of interpreting Scripture: PaRDeS.